Stuart said:Can you direct me to a Peat resource that explains how improved thyroid function controls pathogenic bacteria. I thought beneficial bacteria control pathogenic species?
Also, how is pancreatic function related to colon (or broader microbiome) microbiota.
I'm genuinely curious. I really don't know. I thought the health of your pancreas was independent of microbiome mechanisms. More to do with blood sugar regulation etc.
If your health is good, so is your stomach acid, pancreas, all gut motility. That's Peat's view. You get the ability to digest protein and not leave it to feed toxic pathogens in the upper gut. The more material, the more likely it will eventually happen. I never said that having some type of bacteria could not be helpful in controlling some pathogens. I think its plausible. Maybe that if your pancreas is dead, that becomes even more important. But I also find plausible you could get there by getting your digestive system to work by other means. I have not read Peat's view about what exactly keeps colon healthy and how that would be satisfied on various diets.
I am not talking about extreme cases. It is possible that once your are chronically infected or misused antibiotics, you will need work from all perspectives including actively re-introducing species to fight off pathogens.